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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
261
gene expression
255
candidate regulatory elements
238
accessible chromatin
216
target gene predictions
145
chromatin state
93
differential activity
56
binding sites
47
variant allelic effects
35
histone modifications
10
eQTL
9
Fine-mapped variants
5
caQTL
Date released
406
September, 2022
292
February, 2021
155
September, 2023
127
November, 2021
77
February, 2024
40
May, 2021
38
March, 2023
34
June, 2020
24
August, 2021
22
May, 2020
21
January, 2020
20
January, 2021
18
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
11
October, 2022
8
April, 2020
7
October, 2019
6
August, 2018
4
August, 2017
4
January, 2022
4
March, 2024
4
November, 2019
2
May, 2022
1
July, 2020
1
May, 2019
Available data
852
bed bed3+
344
tsv
194
bigWig
141
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1370
Homo sapiens
Biosample type
853
primary cell
344
tissue
143
cell line
30
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1058
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
1005
hg19
360
GRCh38
BIOSAMPLE
TYPE
1370 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 152 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
22
1
11
11
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
+ See 39 more…
cell line
A549
21
1
19
18
2
1
EndoC_BH1
8
8
1
3
1
IMR-90
2
1
2
1
2
1
PC-9
2
1
2
1
1
1
WI38
5
1
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
olfactory neurosphere cell line
1
1
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 5 more…
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