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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
225
candidate regulatory elements
215
gene expression
119
chromatin state
118
target gene predictions
82
accessible chromatin
60
differential activity
35
binding sites
25
variant allelic effects
17
histone modifications
10
eQTL
9
Fine-mapped variants
3
caQTL
Date released
324
September, 2022
252
February, 2021
140
September, 2023
29
August, 2021
29
May, 2020
24
January, 2020
23
June, 2020
17
February, 2024
15
March, 2020
14
February, 2020
12
November, 2021
7
October, 2022
5
May, 2021
4
February, 2023
4
January, 2022
4
March, 2023
3
March, 2024
3
November, 2019
2
April, 2020
2
August, 2017
2
May, 2019
2
October, 2019
1
April, 2019
Available data
502
bed bed3+
278
tsv
117
bed bed9
87
txt
61
bigWig
10
bigBed bed9
Organism
918
Homo sapiens
Biosample type
444
primary cell
387
tissue
83
cell line
4
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
764
AMP
140
KPMP
12
ENCODE
2
LungMap
Genome assembly (visualization)
629
hg19
197
GRCh38
BIOSAMPLE
TYPE
918 results
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Clear Filters
candidate regulatory elements
gene expression
chromatin state
target gene predictions
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
endothelial cell of umbilical vein
6
5
4
2
2
1
endothelial cell of hepatic sinusoid
4
6
6
mammary gland epithelial cell
3
3
4
1
1
1
+ See 83 more…
tissue
kidney
29
7
16
14
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 25 more…
cell line
MCF-7
9
5
6
1
3
2
HEK293
3
1
1
1
2
1
T47D
3
2
2
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 12 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
renal cell carcinoma
1
See all biosamples
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