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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
accessible chromatin
69
target gene predictions
68
gene expression
63
candidate regulatory elements
45
chromatin state
42
differential activity
21
eQTL
20
variant allelic effects
15
binding sites
14
Fine-mapped variants
12
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
104
September, 2022
67
February, 2021
47
March, 2023
36
May, 2021
26
February, 2024
21
March, 2020
20
January, 2021
20
September, 2023
19
November, 2021
17
May, 2020
15
January, 2020
9
August, 2021
8
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
2
April, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
270
bed bed3+
115
tsv
74
bigWig
40
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
461
Homo sapiens
Biosample type
220
primary cell
198
tissue
40
cell line
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
398
AMP
20
KPMP
20
T1D
19
ENCODE
2
LungMap
2
community
Genome assembly (visualization)
333
hg19
119
GRCh38
organ_slims!
liver
testis
BIOSAMPLE
TYPE
461 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
chromatin state
differential activity
eQTL
variant allelic effects
binding sites
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
4
6
5
1
2
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
+ See 30 more…
tissue
islet of Langerhans
6
1
11
3
13
1
2
2
1
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
1
3
3
2
2
3
1
tibial artery
3
2
1
3
3
2
2
3
+ See 15 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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