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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 99ChIP-seq
  • 46ATAC-seq
  • 9DNase-seq
  • 5Hi-C
  • 2WGBS
  • 2total RNA-seq
  • 1FAIRE-seq
  • 1pCHi-C
Assay category
  • 99DNA binding
  • 56DNA accessibility
  • 53D chromatin structure
  • 2DNA methylation
  • 2Transcription
Target of assay
  • 70histone
  • 70histone modification
  • 45broad histone mark
  • 25narrow histone mark
  • 21control
  • 8transcription factor
  • 4RNA binding protein
Date released
  • 50May, 2019
  • 47October, 2019
  • 35February, 2023
  • 14February, 2021
  • 8July, 2019
  • 5June, 2019
  • 3March, 2020
  • 3November, 2017
Available data
  • 129bed narrowPeak
  • 124bam
  • 94bigWig
  • 79bigBed narrowPeak
  • 13bed broadPeak
  • 13bigBed broadPeak
  • 11bed bed3+
  • 6tagAlign
  • 3fastq
  • 3hic
  • 3tsv
  • 2bedpe bed3+
  • 2hdf5
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1tar
Organism
  • 165Homo sapiens
Biosample type
  • 120tissue
  • 31primary cell
  • 14cell line
Organ
  • 601liver
  • 457pancreas
  • 321epithelium
  • 265brain
  • 231heart
  • 226kidney
  • 209connective tissue
  • 171vasculature
  • 165blood vessel
  • 119limb
  • 91adipose tissue
  • 88musculature of body
  • 85artery
  • 69blood
  • 69bodily fluid
  • 42eye
  • 42nerve
  • 25spleen
  • 23embryo
  • 22vein
  • 18ureter
  • 13bone element
  • 12skeleton
  • 11lung
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1stomach
  • 1urinary bladder
Project
  • 165AMP
Genome assembly (visualization)
  • 131GRCh38
  • 103hg19
Lab
  • 165AMP-T2D consortium
Audit category:
  • 1audit script error
replicates.library.nucleic_acid_term_name!
  • RNA
BIOSAMPLE
ASSAY

165 results

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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
Hi-C
WGBS
total RNA-seq
FAIRE-seq
pCHi-C
tissue
coronary artery5362
tibial artery2312
aorta13121
ascending aorta161
thoracic aorta161
primary cell
endothelial cell of umbilical vein17221
brain microvascular endothelial cell311
endothelial cell of coronary artery1
endothelial cell of hepatic sinusoid1
kidney capillary endothelial cell1
cell line
smooth muscle cell of the coronary artery68
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