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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 32ChIP-seq
  • 5total RNA-seq
  • 3Hi-C
  • 2DNase-seq
  • 1FAIRE-seq
  • 1pCHi-C
Assay category
  • 32DNA binding
  • 5Transcription
  • 33D chromatin structure
  • 3DNA accessibility
Target of assay
  • 26histone
  • 26histone modification
  • 14broad histone mark
  • 12narrow histone mark
  • 3control
  • 3transcription factor
  • 1RNA binding protein
Date released
  • 22October, 2019
  • 8May, 2019
  • 4July, 2019
  • 3February, 2020
  • 2February, 2021
  • 2March, 2020
  • 2November, 2017
  • 1June, 2019
Available data
  • 37bam
  • 33bigWig
  • 27bed narrowPeak
  • 25bigBed narrowPeak
  • 6bed broadPeak
  • 6bigBed broadPeak
  • 6tsv
  • 4bed bed3+
  • 2fastq
  • 2hdf5
  • 2tagAlign
  • 1bedpe bed3+
  • 1hic
  • 1tar
Organism
  • 44Homo sapiens
Biosample type
  • 26primary cell
  • 16tissue
  • 2cell line
Organ
  • 426liver
  • 201pancreas
  • 169epithelium
  • 96brain
  • 68connective tissue
  • 58blood
  • 58bodily fluid
  • 58kidney
  • 49vasculature
  • 44blood vessel
  • 41heart
  • 22musculature of body
  • 19vein
  • 17adipose tissue
  • 13embryo
  • 11artery
  • 9bone element
  • 8limb
  • 8skeleton
  • 7eye
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1nerve
  • 1ovary
  • 1pituitary gland
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 44AMP
Genome assembly (visualization)
  • 34hg19
  • 28GRCh38
Lab
  • 44AMP-T2D consortium
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

44 results

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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
DNase-seq
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein16111
brain microvascular endothelial cell211
endothelial cell of coronary artery1
endothelial cell of hepatic sinusoid1
smooth muscle cell of the coronary artery1
tissue
thoracic aorta7
tibial artery41
coronary artery11
aorta1
ascending aorta1
cell line
smooth muscle cell of the coronary artery2
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