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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
56
total RNA-seq
46
ATAC-seq
7
DNase-seq
6
single cell RNA-seq
2
Hi-C
2
WGBS
Assay category
67
DNA binding
62
Transcription
53
DNA accessibility
2
3D chromatin structure
2
DNA methylation
Target of assay
44
histone
44
histone modification
31
broad histone mark
18
control
13
narrow histone mark
5
transcription factor
3
RNA binding protein
Date released
64
February, 2021
42
May, 2019
35
February, 2023
25
October, 2019
7
July, 2019
6
August, 2021
4
June, 2019
2
March, 2020
1
November, 2017
Available data
143
bam
117
bigWig
102
bed narrowPeak
62
tsv
54
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
4
tagAlign
2
hic
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
fastq
Organism
186
Homo sapiens
Biosample type
117
tissue
64
cell line
5
primary cell
Organ
745
pancreas
616
connective tissue
474
adipose tissue
365
liver
355
epithelium
352
heart
296
kidney
190
brain
187
vasculature
186
blood vessel
150
bone element
130
artery
114
limb
74
musculature of body
54
eye
42
nerve
24
embryo
24
spleen
19
lung
18
ureter
11
blood
11
bodily fluid
8
skeleton
4
gonad
4
ovary
3
vein
1
lymph node
1
pituitary gland
1
skin of body
Project
186
AMP
Genome assembly (visualization)
159
GRCh38
125
hg19
Lab
186
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
186 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
Hi-C
WGBS
tissue
coronary artery
4
36
2
tibial artery
19
1
2
aorta
13
1
4
1
2
ascending aorta
16
1
1
thoracic aorta
9
2
1
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cell line
smooth muscle cell of the coronary artery
4
52
8
primary cell
endothelial cell of umbilical vein
1
1
1
brain microvascular endothelial cell
1
kidney capillary endothelial cell
1
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