Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2635pQTL
  • 39candidate regulatory elements
  • 28chromatin state
  • 27gene expression
  • 26accessible chromatin
  • 25target gene predictions
  • 16binding sites
  • 13differential activity
  • 9Fine-mapped variants
  • 9variant allelic effects
  • 6histone modifications
  • 3caQTL
  • 3eQTL
Date released
  • 2635February, 2025
  • 60September, 2022
  • 36February, 2021
  • 20September, 2023
  • 15February, 2024
  • 12March, 2020
  • 11January, 2020
  • 11May, 2020
  • 5February, 2020
  • 4February, 2023
  • 4June, 2020
  • 4March, 2023
  • 3March, 2025
  • 3May, 2021
  • 3November, 2019
  • 3November, 2021
  • 2April, 2020
  • 2October, 2019
  • 2October, 2022
  • 1August, 2017
  • 1August, 2021
  • 1March, 2024
  • 1May, 2019
Available data
  • 2685tsv
  • 123bed bed3+
  • 27bed bed9
  • 23bigWig
  • 8bigBed bed9
Organism
  • 2839Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 57EpiMap
  • 30DGA
  • 26ENCODE
  • 20KPMP
  • 17ChIP-Atlas
  • 16GTEx
  • 7AMP
  • 4CMDGA
  • 4HPAP
  • 4STARNET
  • 3T2DKP
Biosample type
  • 2719tissue
  • 114primary cell
  • 6cell line
Organ
  • 2904vasculature
  • 2853bodily fluid
  • 2842blood
  • 2839blood vessel
  • 2658vein
  • 957epithelium
  • 651kidney
  • 463connective tissue
  • 450brain
  • 373musculature of body
  • 310lung
  • 286intestine
  • 267pancreas
  • 254heart
  • 242limb
  • 215embryo
  • 201skin of body
  • 172large intestine
  • 159liver
  • 145extraembryonic component
  • 118stomach
  • 108eye
  • 90adipose tissue
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 82uterus
  • 77prostate gland
  • 73artery
  • 72adrenal gland
  • 72placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 47gonad
  • 42esophagus
  • 42spinal cord
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24nerve
  • 24testis
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 2814AMP
  • 20KPMP
  • 3ENCODE
  • 2LungMap
Genome assembly (visualization)
  • 159hg19
  • 71GRCh38
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

2839 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
chromatin state
gene expression
accessible chromatin
target gene predictions
binding sites
differential activity
Fine-mapped variants
variant allelic effects
histone modifications
caQTL
eQTL
tissue
whole blood26351
coronary artery331333211
tibial artery33132321
ascending aorta43112311
aorta4414
primary cell
endothelial cell of umbilical vein652421
endothelial cell of hepatic sinusoid466
dermis blood vessel endothelial cell622
fibroblast of pulmonary artery211121
pulmonary artery endothelial cell211111
cell line
smooth muscle cell of the coronary artery1111
vein endothelial cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego