Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
9
DNA accessibility
9
DNA binding
Target of assay
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
January, 2021
4
January, 2019
3
November, 2018
2
December, 2018
1
January, 2018
Available data
9
bam
9
fastq
4
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
Organism
18
Homo sapiens
Biosample type
10
cell line
8
primary cell
Organ
927
pancreas
644
connective tissue
515
epithelium
474
adipose tissue
453
liver
376
heart
344
kidney
283
brain
227
vasculature
222
blood vessel
159
bone element
136
artery
limb
96
musculature of body
60
eye
43
nerve
34
embryo
22
vein
20
lung
19
spleen
18
blood
18
bodily fluid
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
pericardium
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
10
AMP
8
T1D
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
10
AMP-T2D consortium
8
Kyle Gaulton, UCSD
organ_slims!
limb
pericardium
pituitary gland
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
18 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
9
1
primary cell
peripheral blood mononuclear cell
8
Download