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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
167
target gene predictions
133
candidate regulatory elements
76
chromatin state
74
binding sites
52
histone modifications
50
accessible chromatin
36
gene expression
11
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
pQTL
Date released
211
September, 2022
160
February, 2021
108
February, 2024
27
June, 2020
21
August, 2021
21
October, 2022
14
May, 2021
11
March, 2020
8
November, 2021
6
August, 2017
4
March, 2023
4
May, 2020
3
January, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
January, 2022
2
March, 2024
1
July, 2020
1
November, 2019
1
September, 2018
Available data
486
bed bed3+
69
bed bed9
40
tsv
27
bigWig
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
612
Homo sapiens
Biosample type
360
cell line
107
primary cell
107
tissue
37
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
602
AMP
8
ENCODE
2
T1D
Genome assembly (visualization)
567
hg19
198
GRCh38
2
hg18
BIOSAMPLE
TYPE
612 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
cell line
H1-hESC
39
1
1
2
1
1
8
K562
23
7
7
2
1
1
HepG2
3
2
2
3
5
2
GM12878
8
2
2
2
1
1
H9
8
7
1
+ See 49 more…
primary cell
hepatocyte
3
1
1
1
4
8
13
2
trophoblast cell
5
7
4
1
1
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
1
3
1
1
peripheral blood mononuclear cell
4
1
1
+ See 11 more…
tissue
liver
10
13
9
1
2
4
1
7
1
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
vagina
2
4
2
1
1
right lobe of liver
1
2
1
1
1
3
+ See 7 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
hepatocyte
1
2
1
+ See 5 more…
stem cell
H1-hESC
1
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