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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
104
target gene predictions
80
accessible chromatin
75
candidate regulatory elements
53
binding sites
49
gene expression
46
chromatin state
33
differential activity
32
histone modifications
17
eQTL
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
1
pQTL
Date released
125
September, 2022
110
February, 2021
54
February, 2024
47
March, 2023
37
May, 2021
20
January, 2021
20
November, 2021
19
October, 2022
17
June, 2020
11
August, 2021
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
April, 2020
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
363
bed bed3+
77
tsv
59
bigWig
40
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
511
Homo sapiens
Biosample type
239
cell line
151
primary cell
118
tissue
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
intestine
277
pancreas
266
vasculature
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
468
AMP
20
ENCODE
20
T1D
2
community
1
LungMap
Genome assembly (visualization)
419
hg19
118
GRCh38
organ_slims!
heart
intestine
BIOSAMPLE
TYPE
511 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
gene expression
chromatin state
differential activity
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
pQTL
cell line
K562
23
1
7
2
7
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
2
1
1
2
1
1
+ See 32 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 17 more…
tissue
islet of Langerhans
1
6
2
11
3
1
13
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
1
3
1
1
1
endocrine pancreas
4
7
4
blood
2
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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