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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
267
candidate regulatory elements
254
gene expression
246
target gene predictions
225
accessible chromatin
147
chromatin state
98
binding sites
92
differential activity
57
histone modifications
37
variant allelic effects
6
eQTL
2
caQTL
1
pQTL
Date released
424
September, 2022
333
February, 2021
155
September, 2023
118
November, 2021
100
February, 2024
42
June, 2020
42
May, 2021
38
March, 2023
29
October, 2022
26
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
April, 2020
7
March, 2020
6
August, 2017
6
August, 2018
5
October, 2019
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
935
bed bed3+
325
tsv
172
bigWig
141
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1432
Homo sapiens
Biosample type
828
primary cell
344
cell line
234
tissue
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1129
AMP
155
KPMP
118
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
1081
hg19
345
GRCh38
organ_slims!
esophagus
stomach
BIOSAMPLE
TYPE
1432 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
pQTL
primary cell
endothelial cell
9
7
15
2
1
2
1
2
hepatocyte
1
13
3
8
1
1
4
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 144 more…
cell line
A549
21
19
1
18
2
1
K562
7
23
1
7
2
1
EndoC_BH1
8
1
8
3
1
GM12878
2
8
1
2
2
1
IMR-90
2
2
1
1
2
1
+ See 45 more…
tissue
lung
33
1
17
16
1
left lung
26
13
13
right lung
22
11
1
11
pigmented layer of retina
20
upper lobe of left lung
7
3
1
3
1
1
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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