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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
226
accessible chromatin
187
target gene predictions
172
candidate regulatory elements
92
differential activity
90
binding sites
86
chromatin state
53
histone modifications
41
variant allelic effects
6
eQTL
2
caQTL
1
pQTL
Date released
280
February, 2021
244
September, 2022
155
September, 2023
127
November, 2021
104
February, 2024
39
May, 2021
38
June, 2020
38
March, 2023
26
August, 2021
25
October, 2022
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
5
August, 2017
5
October, 2019
4
March, 2024
2
May, 2022
2
November, 2019
1
January, 2022
1
July, 2020
Available data
773
bed bed3+
326
tsv
177
bigWig
81
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1211
Homo sapiens
Biosample type
838
primary cell
248
cell line
99
tissue
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
900
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
859
hg19
305
GRCh38
organ_slims!
lymph node
BIOSAMPLE
TYPE
1211 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
pQTL
primary cell
endothelial cell
9
15
7
3
2
1
2
1
2
hepatocyte
13
8
3
2
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
2
5
1
+ See 148 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
1
2
1
2
1
1
+ See 37 more…
tissue
spleen
1
2
8
15
1
6
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
blood
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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