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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
candidate regulatory elements
97
accessible chromatin
93
target gene predictions
65
binding sites
58
chromatin state
44
histone modifications
27
gene expression
11
eQTL
6
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
1
pQTL
Date released
163
September, 2022
122
February, 2021
59
February, 2024
25
June, 2020
24
February, 2023
22
November, 2022
22
October, 2022
13
August, 2021
10
March, 2020
9
November, 2021
7
May, 2021
5
August, 2017
5
January, 2020
5
May, 2020
4
February, 2020
4
March, 2023
2
March, 2024
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
409
bed bed3+
59
bigWig
53
bed bed9
32
tsv
3
csv
1
bam
1
bigBed bed9
Organism
509
Homo sapiens
Biosample type
249
cell line
150
tissue
97
primary cell
13
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
500
AMP
9
ENCODE
Genome assembly (visualization)
473
hg19
137
GRCh38
2
hg18
BIOSAMPLE
TYPE
509 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
chromatin state
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
cell line
K562
7
1
23
2
7
1
HepG2
2
2
3
3
2
5
GM12878
2
1
8
2
2
1
GM06990
2
1
1
2
1
1
GM19240
1
1
2
2
1
1
+ See 34 more…
tissue
liver
13
4
10
1
9
2
1
7
1
1
retina
6
23
3
1
3
1
1
1
1
pigmented layer of retina
20
Peyer's patch
7
1
3
3
eye
4
1
2
2
+ See 7 more…
primary cell
hepatocyte
2
8
3
1
1
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
2
3
1
1
1
1
1
retinal pigment epithelial cell
2
3
1
2
1
1
peripheral blood mononuclear cell
4
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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