Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
71
target gene predictions
69
candidate regulatory elements
49
binding sites
38
chromatin state
26
histone modifications
18
accessible chromatin
6
eQTL
4
gene expression
1
pQTL
Date released
108
September, 2022
88
February, 2021
28
February, 2024
20
October, 2022
17
June, 2020
5
May, 2021
4
January, 2022
4
March, 2024
3
August, 2021
2
August, 2017
2
November, 2021
1
March, 2020
Available data
236
bed bed3+
36
bed bed9
4
tsv
1
bigWig
Organism
282
Homo sapiens
Biosample type
212
cell line
53
tissue
13
primary cell
4
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
280
AMP
2
ENCODE
Genome assembly (visualization)
274
hg19
70
GRCh38
BIOSAMPLE
TYPE
282 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 28 more…
tissue
ovary
6
8
4
1
1
1
testis
3
7
1
3
1
1
1
1
vagina
2
4
2
1
1
blood
2
cerebrospinal fluid
1
+ See 1 more…
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
luteal cell
1
1
Leydig cell
1
somatic gonadal cell
1
in vitro differentiated cells
olfactory neurosphere cell line
1
1
1
1
See all biosamples
Download