Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
190
candidate regulatory elements
152
target gene predictions
103
chromatin state
64
binding sites
41
accessible chromatin
39
histone modifications
5
eQTL
4
gene expression
4
variant allelic effects
1
pQTL
Date released
287
September, 2022
174
February, 2021
36
February, 2024
27
June, 2020
25
November, 2021
23
October, 2022
12
May, 2021
7
August, 2017
4
March, 2024
3
August, 2021
3
January, 2022
2
March, 2020
Available data
498
bed bed3+
96
bed bed9
14
bigWig
4
tsv
Organism
603
Homo sapiens
Biosample type
281
cell line
241
tissue
78
primary cell
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
578
AMP
25
ENCODE
Genome assembly (visualization)
596
hg19
155
GRCh38
BIOSAMPLE
TYPE
603 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
pQTL
cell line
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
1
2
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
+ See 38 more…
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 20 more…
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
+ See 9 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
See all biosamples
Download