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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
246
candidate regulatory elements
206
gene expression
153
target gene predictions
123
chromatin state
69
accessible chromatin
64
binding sites
56
differential activity
39
histone modifications
17
variant allelic effects
10
eQTL
1
pQTL
Date released
357
September, 2022
301
February, 2021
140
September, 2023
34
June, 2020
31
August, 2021
30
February, 2024
22
October, 2022
19
May, 2020
14
January, 2020
9
February, 2020
6
March, 2024
6
May, 2021
5
January, 2022
3
March, 2020
3
November, 2021
2
August, 2017
1
April, 2019
1
May, 2019
Available data
587
bed bed3+
255
tsv
121
bed bed9
87
txt
36
bigWig
2
bigBed bed9
Organism
984
Homo sapiens
Biosample type
348
tissue
329
primary cell
306
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
841
AMP
140
KPMP
3
ENCODE
Genome assembly (visualization)
711
hg19
181
GRCh38
BIOSAMPLE
TYPE
984 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
pQTL
tissue
kidney
29
7
14
16
10
1
2
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 22 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
epithelial cell of prostate
4
3
2
+ See 68 more…
cell line
K562
7
23
7
1
2
1
GM12878
2
8
2
1
2
1
22Rv1
4
2
2
1
1
HEK293
3
1
1
1
2
1
GM06990
2
1
1
1
2
1
+ See 50 more…
in vitro differentiated cells
renal cell carcinoma
1
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