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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
199
candidate regulatory elements
151
target gene predictions
102
chromatin state
70
binding sites
43
histone modifications
37
accessible chromatin
8
eQTL
6
gene expression
2
variant allelic effects
1
pQTL
Date released
287
September, 2022
192
February, 2021
33
February, 2024
28
June, 2020
24
October, 2022
18
November, 2021
15
May, 2021
6
August, 2017
6
January, 2022
6
March, 2024
3
August, 2021
1
March, 2020
Available data
509
bed bed3+
96
bed bed9
9
bigWig
6
tsv
Organism
619
Homo sapiens
Biosample type
309
cell line
183
tissue
118
primary cell
9
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
601
AMP
18
ENCODE
Genome assembly (visualization)
607
hg19
150
GRCh38
BIOSAMPLE
TYPE
619 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
pQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 54 more…
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
thyroid gland
8
5
4
1
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 19 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
2
1
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 12 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
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