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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
165
target gene predictions
151
candidate regulatory elements
82
chromatin state
52
binding sites
36
accessible chromatin
29
histone modifications
9
Fine-mapped variants
8
eQTL
8
gene expression
8
variant allelic effects
1
pQTL
Date released
228
September, 2022
142
February, 2021
79
February, 2024
21
June, 2020
20
October, 2022
10
May, 2020
9
March, 2020
9
May, 2021
7
January, 2020
6
February, 2020
4
March, 2024
3
August, 2021
3
January, 2022
2
August, 2017
2
May, 2019
2
November, 2019
2
November, 2021
Available data
444
bed bed3+
80
bed bed9
20
tsv
15
bigWig
4
bigBed bed9
Organism
549
Homo sapiens
Biosample type
277
cell line
253
tissue
15
primary cell
4
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
547
AMP
2
ENCODE
Genome assembly (visualization)
538
hg19
190
GRCh38
BIOSAMPLE
TYPE
549 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
gene expression
variant allelic effects
pQTL
cell line
HeLa-S3
55
5
3
1
K562
23
7
7
2
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
+ See 29 more…
tissue
muscle of arm
16
33
16
1
1
muscle of leg
14
27
15
2
tibial nerve
3
6
4
3
3
2
2
2
tibial artery
2
3
3
3
3
2
1
2
gastrocnemius medialis
5
8
4
1
+ See 25 more…
primary cell
peripheral blood mononuclear cell
4
1
1
Ishikawa
1
1
1
peripheral blood stem cell
1
1
1
uterine smooth muscle cell
1
1
fibroblast of arm
1
in vitro differentiated cells
olfactory neurosphere cell line
1
1
1
1
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