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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
217
candidate regulatory elements
204
target gene predictions
113
chromatin state
68
binding sites
47
accessible chromatin
40
histone modifications
11
eQTL
9
Fine-mapped variants
9
gene expression
9
variant allelic effects
1
pQTL
Date released
318
September, 2022
201
February, 2021
80
February, 2024
27
June, 2020
24
October, 2022
13
May, 2021
12
November, 2021
10
May, 2020
9
March, 2020
7
January, 2020
6
February, 2020
6
January, 2022
5
March, 2024
3
August, 2017
3
August, 2021
2
May, 2019
2
November, 2019
Available data
589
bed bed3+
110
bed bed9
21
tsv
20
bigWig
4
bigBed bed9
Organism
728
Homo sapiens
Biosample type
340
cell line
265
tissue
114
primary cell
9
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
716
AMP
12
ENCODE
Genome assembly (visualization)
713
hg19
233
GRCh38
BIOSAMPLE
TYPE
728 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
Fine-mapped variants
gene expression
variant allelic effects
pQTL
cell line
HeLa-S3
5
55
3
1
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
+ See 48 more…
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
tibial nerve
6
3
4
3
2
3
2
2
tibial artery
3
2
3
3
2
3
1
2
gastrocnemius medialis
8
5
4
1
+ See 29 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
1
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 12 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
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