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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
74
target gene predictions
68
candidate regulatory elements
52
binding sites
42
chromatin state
35
histone modifications
22
accessible chromatin
10
eQTL
4
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
pQTL
1
variant allelic effects
Date released
115
September, 2022
94
February, 2021
29
February, 2024
20
October, 2022
16
June, 2020
10
August, 2021
6
March, 2020
6
May, 2021
5
August, 2017
2
February, 2020
2
January, 2020
2
May, 2022
1
January, 2022
1
March, 2024
1
May, 2020
1
May, 2024
1
November, 2019
1
November, 2021
1
September, 2018
Available data
257
bed bed3+
37
bed bed9
9
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
314
Homo sapiens
Biosample type
233
cell line
62
tissue
19
primary cell
Organ
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
313
AMP
1
ENCODE
Genome assembly (visualization)
305
hg19
80
GRCh38
2
hg18
organ_slims!
epithelium
extraembryonic component
BIOSAMPLE
TYPE
314 results
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target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
Fine-mapped variants
caQTL
differential activity
pQTL
variant allelic effects
cell line
K562
23
7
2
7
1
1
HepG2
3
2
3
2
5
2
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 30 more…
tissue
liver
10
13
1
9
2
4
7
1
1
1
right lobe of liver
1
2
1
1
1
3
blood
2
cerebrospinal fluid
1
whole blood
1
primary cell
hepatic stellate cell
1
2
1
1
3
1
1
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
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