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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
91
candidate regulatory elements
88
target gene predictions
60
binding sites
52
chromatin state
39
histone modifications
38
accessible chromatin
27
gene expression
12
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
pQTL
Date released
145
September, 2022
112
February, 2021
57
February, 2024
20
October, 2022
18
June, 2020
13
August, 2021
11
March, 2020
8
May, 2021
5
August, 2017
5
November, 2021
4
March, 2023
3
January, 2020
3
January, 2022
3
March, 2024
3
May, 2020
2
February, 2020
2
May, 2022
2
May, 2024
2
November, 2019
1
July, 2020
1
September, 2018
Available data
325
bed bed3+
47
bed bed9
31
tsv
24
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
420
Homo sapiens
Biosample type
233
cell line
106
tissue
74
primary cell
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
415
AMP
5
ENCODE
Genome assembly (visualization)
383
hg19
126
GRCh38
2
hg18
BIOSAMPLE
TYPE
420 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
cell line
K562
7
23
2
7
1
1
HepG2
2
3
3
2
5
2
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
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tissue
liver
13
10
1
9
2
4
1
7
1
1
spleen
15
8
1
6
2
1
1
vagina
4
2
2
1
1
right lobe of liver
2
1
1
1
1
3
blood
2
+ See 2 more…
primary cell
hepatocyte
2
3
1
1
4
8
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
2
1
1
1
3
1
1
peripheral blood mononuclear cell
4
1
1
pancreatic endothelial cell
1
3
+ See 2 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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