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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
210
candidate regulatory elements
149
target gene predictions
111
chromatin state
62
binding sites
38
accessible chromatin
34
histone modifications
3
eQTL
2
gene expression
1
pQTL
1
variant allelic effects
Date released
324
September, 2022
181
February, 2021
29
February, 2024
25
October, 2022
21
June, 2020
9
May, 2021
9
November, 2021
3
April, 2020
3
August, 2017
3
August, 2021
2
March, 2024
1
January, 2022
1
March, 2020
Available data
498
bed bed3+
108
bed bed9
17
bigWig
2
tsv
Organism
611
Homo sapiens
Biosample type
316
cell line
205
tissue
84
primary cell
6
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
599
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
608
hg19
154
GRCh38
BIOSAMPLE
TYPE
611 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
pQTL
variant allelic effects
cell line
A549
21
19
18
2
1
1
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
IMR-90
2
2
1
2
1
1
GM06990
2
1
1
2
1
1
+ See 38 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
femur
2
1
1
+ See 14 more…
primary cell
foreskin keratinocyte
11
4
4
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
4
1
2
type II pneumocyte
2
4
1
foreskin melanocyte
4
1
1
+ See 6 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
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