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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 60ChIP-seq
  • 6snATAC-seq
  • 1ATAC-seq
Assay category
  • 60DNA binding
  • 7DNA accessibility
Target of assay
  • 51transcription factor
  • 10RNA binding protein
  • 10chromatin remodeller
  • 6control
  • 1histone
  • 1histone modification
  • 1narrow histone mark
Date released
  • 27December, 2018
  • 18January, 2019
  • 15November, 2018
  • 6January, 2021
  • 1January, 2018
Available data
  • 60bam
  • 60fastq
  • 55bigWig
  • 54bed narrowPeak
  • 54bigBed narrowPeak
Organism
  • 67Homo sapiens
Biosample type
  • 61cell line
  • 6primary cell
Organ
  • 808pancreas
  • 775liver
  • 627connective tissue
  • 474adipose tissue
  • 443epithelium
  • 368heart
  • 335kidney
  • 229vasculature
  • 223blood vessel
  • 215brain
  • 151bone element
  • 137artery
  • 119limb
  • 87musculature of body
  • 67blood
  • 67bodily fluid
  • 58eye
  • 42nerve
  • 35embryo
  • 24spleen
  • 21vein
  • 19lung
  • 18ureter
  • 8skeleton
  • 4gonad
  • 4ovary
  • 1bone marrow
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1thymus
Project
  • 61AMP
  • 6T1D
Genome assembly (visualization)
  • 55hg19
  • 54GRCh38
Lab
  • 61AMP-T2D consortium
  • 6Kyle Gaulton, UCSD
Audit category:
  • 1inconsistent control
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

67 results

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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878601
primary cell
peripheral blood mononuclear cell6
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