Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56ChIP-seq
  • 2snATAC-seq
Assay category
  • 56DNA binding
  • 2DNA accessibility
Target of assay
  • 49transcription factor
  • 9RNA binding protein
  • 8chromatin remodeller
  • 4control
  • 1histone
  • 1histone modification
  • 1narrow histone mark
Date released
  • 27December, 2018
  • 16January, 2019
  • 13November, 2018
  • 2January, 2021
Available data
  • 56bam
  • 56fastq
  • 52bed narrowPeak
  • 52bigBed narrowPeak
  • 52bigWig
Organism
  • 58Homo sapiens
Biosample type
  • 56cell line
  • 2primary cell
Organ
  • 426liver
  • 201pancreas
  • 169epithelium
  • 96brain
  • 68connective tissue
  • 58blood
  • 58bodily fluid
  • 58kidney
  • 49vasculature
  • 44blood vessel
  • 41heart
  • 22musculature of body
  • 19vein
  • 17adipose tissue
  • 13embryo
  • 11artery
  • 9bone element
  • 8limb
  • 8skeleton
  • 7eye
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1nerve
  • 1ovary
  • 1pituitary gland
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 56AMP
  • 2T1D
Genome assembly (visualization)
  • 52GRCh38
  • 52hg19
Lab
  • 56AMP-T2D consortium
  • 2Kyle Gaulton, UCSD
Audit category:
  • 1inconsistent control
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

58 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
cell line
GM1287856
primary cell
peripheral blood mononuclear cell2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego