Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2636pQTL
  • 57target gene predictions
  • 46binding sites
  • 27chromatin state
  • 25candidate regulatory elements
  • 25histone modifications
  • 12accessible chromatin
  • 2eQTL
  • 1gene expression
Date released
  • 2635February, 2025
  • 75September, 2022
  • 52February, 2021
  • 28February, 2024
  • 19October, 2022
  • 12June, 2020
  • 4May, 2021
  • 3August, 2021
  • 2August, 2017
  • 1March, 2024
Available data
  • 2636tsv
  • 170bed bed3+
  • 25bed bed9
Organism
  • 2831Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 75EpiMap
  • 64ChIP-Atlas
  • 284DN
  • 19ENCODE
  • 4DGA
  • 3AMP
  • 3T2DKP
  • 1GTEx
Biosample type
  • 2639tissue
  • 187cell line
  • 5primary cell
Organ
  • 3345blood
  • 2876vasculature
  • 2841blood vessel
  • 2831bodily fluid
  • 2655vein
  • 900epithelium
  • 852brain
  • 672kidney
  • 478connective tissue
  • 454heart
  • 379lung
  • 308musculature of body
  • 308pancreas
  • 300intestine
  • 255skin of body
  • 231liver
  • 196limb
  • 190large intestine
  • 185embryo
  • 152eye
  • 148extraembryonic component
  • 131adipose tissue
  • 112stomach
  • 111muscle organ
  • 95bone element
  • 90mammary gland
  • 88adrenal gland
  • 88uterus
  • 84artery
  • 84placenta
  • 84thymus
  • 79small intestine
  • 73prostate gland
  • 60__MARKER__
  • 55gonad
  • 55ureter
  • 54spleen
  • 49lymph node
  • 46penis
  • 43thyroid gland
  • 41spinal cord
  • 38esophagus
  • 28ovary
  • 26testis
  • 23skeleton
  • 22nerve
  • 20lymphoid tissue
  • 19lymphatic vessel
  • 17mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 12breast
  • 12urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 2831AMP
Genome assembly (visualization)
  • 195hg19
  • 53GRCh38
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

2831 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
binding sites
chromatin state
candidate regulatory elements
histone modifications
accessible chromatin
eQTL
gene expression
tissue
whole blood26351
blood2
cerebrospinal fluid1
cell line
K5622327611
GM12878822111
GM19240221111
NAMALWA cell21221
GM06990121111
primary cell
peripheral blood stem cell111
peripheral blood mononuclear cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego