Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2636pQTL
  • 57target gene predictions
  • 47candidate regulatory elements
  • 46binding sites
  • 27chromatin state
  • 25histone modifications
  • 12accessible chromatin
  • 2eQTL
  • 1gene expression
Date released
  • 2635February, 2025
  • 75September, 2022
  • 74February, 2021
  • 28February, 2024
  • 19October, 2022
  • 12June, 2020
  • 4May, 2021
  • 3August, 2021
  • 2August, 2017
  • 1March, 2024
Available data
  • 2636tsv
  • 192bed bed3+
  • 25bed bed9
Organism
  • 2853Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 75EpiMap
  • 64ChIP-Atlas
  • 41ENCODE
  • 284DN
  • 4DGA
  • 3AMP
  • 3T2DKP
  • 1GTEx
Biosample type
  • 2639tissue
  • 205cell line
  • 9primary cell
Organ
  • 2904vasculature
  • 2853bodily fluid
  • 2842blood
  • 2839blood vessel
  • 2658vein
  • 957epithelium
  • 651kidney
  • 463connective tissue
  • 450brain
  • 373musculature of body
  • 310lung
  • 286intestine
  • 267pancreas
  • 254heart
  • 242limb
  • 215embryo
  • 201skin of body
  • 172large intestine
  • 159liver
  • 145extraembryonic component
  • 118stomach
  • 108eye
  • 90adipose tissue
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 82uterus
  • 77prostate gland
  • 73artery
  • 72adrenal gland
  • 72placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 47gonad
  • 42esophagus
  • 42spinal cord
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24nerve
  • 24testis
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 2853AMP
Genome assembly (visualization)
  • 217hg19
  • 53GRCh38
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

2853 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
tissue
whole blood26351
blood2
cerebrospinal fluid1
cell line
K5622372711
GM12878822211
GM06990122111
GM19240212111
HAP-1221111
primary cell
peripheral blood mononuclear cell411
peripheral blood stem cell111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego