Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 23candidate regulatory elements
  • 13accessible chromatin
  • 13chromatin state
  • 13target gene predictions
  • 6binding sites
  • 4gene expression
  • 4histone modifications
Date released
  • 39September, 2022
  • 31February, 2021
  • 5June, 2020
  • 1October, 2022
Available data
  • 59bed bed3+
  • 13bed bed9
  • 8bigWig
  • 4tsv
Organism
  • 76Homo sapiens
Collection Tags
  • 39EpiMap
  • 14ChIP-Atlas
  • 12DGA
  • 11ENCODE
Biosample type
  • 53cell line
  • 22tissue
  • 1primary cell
Organ
  • 2913vasculature
  • 2859bodily fluid
  • 2848blood
  • 2848blood vessel
  • 2658vein
  • 958epithelium
  • 652kidney
  • 480connective tissue
  • 467brain
  • 380musculature of body
  • 311lung
  • 289intestine
  • 277pancreas
  • 257heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 163liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 99adipose tissue
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 76AMP
Genome assembly (visualization)
  • 72hg19
  • 21GRCh38
organ_slims!
  • bone marrow
BIOSAMPLE
TYPE

76 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
target gene predictions
binding sites
gene expression
histone modifications
cell line
MG63211111
OCI-LY121111
SJSA121111
L1-S82111
OCI-LY32111
tissue
bone tissue4
femur211
arm bone111
leg bone111
distal epiphysis1
primary cell
bone cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego