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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
152
candidate regulatory elements
104
target gene predictions
96
chromatin state
54
histone modifications
53
accessible chromatin
36
Fine-mapped variants
29
eQTL
23
gene expression
22
binding sites
13
variant allelic effects
Date released
249
September, 2022
153
February, 2021
39
March, 2020
26
June, 2020
24
January, 2020
18
February, 2020
18
January, 2022
17
May, 2020
12
May, 2021
6
August, 2017
5
October, 2022
4
May, 2019
3
September, 2023
2
January, 2021
2
November, 2021
1
February, 2024
1
March, 2024
1
May, 2022
1
November, 2019
Available data
397
bed bed3+
89
bed bed9
71
tsv
27
bigWig
6
bigBed bed9
1
bed bed9+
Organism
581
Homo sapiens
Biosample type
419
tissue
127
cell line
31
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
578
AMP
2
ENCODE
2
T1D
Genome assembly (visualization)
535
hg19
180
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
582 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
gene expression
binding sites
variant allelic effects
tissue
brain
29
16
18
3
2
2
1
1
1
thymus
20
14
11
1
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
+ See 69 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 19 more…
primary cell
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
brain pericyte
1
1
1
+ See 6 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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