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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
230
gene expression
189
accessible chromatin
153
candidate regulatory elements
135
target gene predictions
87
chromatin state
66
differential activity
55
binding sites
41
histone modifications
35
variant allelic effects
12
eQTL
3
Fine-mapped variants
3
caQTL
Date released
248
February, 2021
241
September, 2022
155
September, 2023
112
November, 2021
56
February, 2024
34
June, 2020
30
August, 2021
16
January, 2020
16
May, 2020
15
November, 2022
11
February, 2020
11
February, 2023
11
March, 2020
11
May, 2021
8
October, 2022
7
April, 2020
6
August, 2017
5
May, 2022
4
January, 2021
4
March, 2023
3
March, 2024
2
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
613
bed bed3+
287
tsv
146
bigWig
80
bed bed9
78
txt
3
bigBed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed narrowPeak
Organism
1009
Homo sapiens
Biosample type
736
primary cell
145
tissue
105
cell line
23
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
731
AMP
155
KPMP
112
ENCODE
7
LungMap
4
T1D
Genome assembly (visualization)
704
hg19
258
GRCh38
2
hg18
organ_slims!
pancreas
BIOSAMPLE
TYPE
1009 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
1
3
1
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 143 more…
tissue
liver
1
4
13
10
9
1
1
2
7
1
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
right lobe of liver
1
2
1
1
1
3
+ See 25 more…
cell line
HepG2
2
2
3
2
3
5
MG63
1
2
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
1
2
1
1
1
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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