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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
accessible chromatin
79
candidate regulatory elements
79
target gene predictions
52
gene expression
49
chromatin state
33
differential activity
15
eQTL
14
histone modifications
13
binding sites
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
137
September, 2022
82
February, 2021
47
March, 2023
35
May, 2021
25
February, 2024
22
January, 2021
20
November, 2021
13
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
7
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
1
October, 2022
Available data
285
bed bed3+
80
tsv
68
bigWig
44
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
1
bed bed9+
Organism
439
Homo sapiens
Biosample type
174
tissue
170
primary cell
87
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
prostate gland
75
artery
73
adrenal gland
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
395
AMP
22
T1D
20
ENCODE
2
community
Genome assembly (visualization)
344
hg19
102
GRCh38
organ_slims!
placenta
prostate gland
BIOSAMPLE
TYPE
439 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
differential activity
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
chorionic villus
8
4
4
endocrine pancreas
7
4
4
+ See 23 more…
primary cell
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
trophoblast cell
1
7
5
4
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
+ See 25 more…
cell line
EndoC_BH1
8
1
8
3
1
MG63
1
2
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
1
2
1
1
1
L1-S8
1
2
1
1
+ See 12 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
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