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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
181
candidate regulatory elements
124
target gene predictions
102
chromatin state
62
accessible chromatin
31
gene expression
29
histone modifications
28
binding sites
11
eQTL
7
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
285
September, 2022
144
February, 2021
35
February, 2024
26
November, 2021
21
June, 2020
13
March, 2020
10
August, 2021
10
May, 2021
7
August, 2017
5
May, 2020
4
January, 2022
4
March, 2023
3
January, 2020
3
March, 2024
3
May, 2022
3
October, 2022
2
February, 2020
2
January, 2021
1
July, 2020
1
November, 2019
1
September, 2018
Available data
437
bed bed3+
94
bed bed9
45
bigWig
35
tsv
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
583
Homo sapiens
Biosample type
360
tissue
115
cell line
101
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
555
AMP
26
ENCODE
2
T1D
Genome assembly (visualization)
541
hg19
174
GRCh38
2
hg18
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
583 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
liver
13
10
9
4
1
2
1
7
1
1
thymus
20
14
11
1
1
1
sigmoid colon
10
7
5
1
+ See 30 more…
cell line
HepG2
2
3
2
2
5
3
HT-29
2
2
1
1
1
1
MG63
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 18 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
colon epithelial cell
3
3
enterocyte
3
3
+ See 14 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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