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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
142
candidate regulatory elements
85
target gene predictions
72
chromatin state
30
accessible chromatin
22
binding sites
17
histone modifications
6
gene expression
2
eQTL
Date released
203
September, 2022
121
February, 2021
16
June, 2020
8
November, 2021
7
May, 2021
4
October, 2022
3
August, 2017
3
February, 2024
2
January, 2021
2
January, 2022
2
March, 2020
2
March, 2024
2
May, 2020
1
May, 2022
Available data
299
bed bed3+
68
bed bed9
14
bigWig
6
tsv
1
bed bed9+
Organism
376
Homo sapiens
Biosample type
206
tissue
102
cell line
62
primary cell
6
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
366
AMP
8
ENCODE
2
T1D
Genome assembly (visualization)
368
hg19
88
GRCh38
BIOSAMPLE
TYPE
376 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
27
14
13
1
1
thymus
20
14
11
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 21 more…
cell line
HT-29
2
2
1
1
1
1
MG63
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
OCI-LY1
2
1
1
1
1
+ See 18 more…
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
1
4
2
colon epithelial cell
3
3
foreskin melanocyte
4
1
1
megakaryocyte
2
2
+ See 6 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
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