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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
candidate regulatory elements
69
accessible chromatin
68
target gene predictions
65
chromatin state
59
gene expression
36
binding sites
28
histone modifications
19
differential activity
19
variant allelic effects
14
eQTL
12
Fine-mapped variants
4
caQTL
Date released
163
September, 2022
111
February, 2021
35
September, 2023
32
February, 2024
22
March, 2020
19
January, 2020
19
May, 2020
16
June, 2020
11
August, 2021
10
November, 2021
7
February, 2020
6
May, 2021
6
October, 2022
5
May, 2024
4
August, 2017
4
February, 2023
4
January, 2022
4
March, 2023
4
November, 2019
3
April, 2020
3
May, 2022
2
January, 2021
2
October, 2019
1
July, 2020
1
March, 2024
1
May, 2019
1
September, 2018
Available data
327
bed bed3+
88
tsv
60
bed bed9
58
bigWig
9
bigBed bed9
3
csv
2
txt
1
bam
1
bed bed9+
Organism
496
Homo sapiens
Biosample type
231
primary cell
164
tissue
92
cell line
9
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
446
AMP
35
KPMP
10
ENCODE
3
LungMap
2
T1D
Genome assembly (visualization)
406
hg19
159
GRCh38
2
hg18
organ_slims!
stomach
BIOSAMPLE
TYPE
496 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
2
8
3
1
13
1
4
2
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
hepatic stellate cell
2
3
1
1
1
1
1
+ See 36 more…
tissue
liver
13
4
10
9
1
1
2
1
7
1
coronary artery
3
3
3
3
1
2
2
3
1
tibial artery
3
3
2
3
1
2
2
3
ascending aorta
4
1
2
3
1
1
1
3
aorta
4
4
4
1
+ See 18 more…
cell line
HepG2
2
2
3
2
3
5
MG63
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
+ See 14 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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