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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
80
accessible chromatin
60
target gene predictions
53
gene expression
49
candidate regulatory elements
33
differential activity
32
chromatin state
15
eQTL
13
binding sites
12
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
86
September, 2022
67
February, 2021
47
March, 2023
33
May, 2021
25
February, 2024
22
January, 2021
19
November, 2021
9
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
7
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
3
August, 2017
3
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
1
October, 2022
Available data
229
bed bed3+
80
tsv
67
bigWig
27
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
1
bed bed9+
Organism
367
Homo sapiens
Biosample type
141
primary cell
136
tissue
87
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
324
AMP
22
T1D
19
ENCODE
2
community
Genome assembly (visualization)
271
hg19
84
GRCh38
organ_slims!
artery
ureter
BIOSAMPLE
TYPE
367 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 19 more…
tissue
islet of Langerhans
6
1
11
3
13
2
1
1
2
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
bone tissue
4
+ See 18 more…
cell line
EndoC_BH1
8
1
8
3
1
MG63
1
1
2
1
1
1
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
+ See 12 more…
in vitro differentiated cells
pancreatic ductal cell
3
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