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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
82
accessible chromatin
68
target gene predictions
64
candidate regulatory elements
53
gene expression
38
chromatin state
33
differential activity
16
eQTL
14
binding sites
12
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
104
September, 2022
77
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
22
January, 2021
19
November, 2021
10
June, 2020
10
March, 2020
8
August, 2021
7
August, 2018
7
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
3
November, 2019
2
February, 2020
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2022
1
October, 2022
Available data
255
bed bed3+
81
tsv
68
bigWig
33
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
1
bed bed9+
Organism
400
Homo sapiens
Biosample type
170
tissue
140
primary cell
87
cell line
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
357
AMP
22
T1D
19
ENCODE
2
community
Genome assembly (visualization)
303
hg19
92
GRCh38
organ_slims!
mouth
BIOSAMPLE
TYPE
400 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
2
1
1
2
2
2
spleen
2
8
15
1
6
1
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 19 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 18 more…
cell line
EndoC_BH1
8
1
8
3
1
MG63
1
1
2
1
1
1
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
+ See 12 more…
in vitro differentiated cells
pancreatic ductal cell
3
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