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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
63
total RNA-seq
6
ATAC-seq
1
RRBS
1
pCHi-C
Assay category
63
Transcription
6
DNA accessibility
1
DNA methylation
Date released
144
February, 2021
8
February, 2023
2
July, 2019
1
May, 2021
Available data
88
txt
61
bam
59
bigWig
59
tsv
4
bed bed3
2
bed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
155
Homo sapiens
Biosample type
153
tissue
2
primary cell
Organ
893
pancreas
683
liver
649
connective tissue
494
epithelium
467
adipose tissue
373
heart
342
kidney
255
brain
214
vasculature
209
blood vessel
159
bone element
132
artery
limb
90
musculature of body
63
blood
63
bodily fluid
eye
32
nerve
30
embryo
20
lung
20
vein
18
ureter
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
154
AMP
1
T1D
Genome assembly (visualization)
66
hg19
61
GRCh38
Lab
154
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
organ_slims!
eye
limb
target.investigated_as!
control
BIOSAMPLE
ASSAY
155 results
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RNA microarray
total RNA-seq
ATAC-seq
RRBS
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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primary cell
megakaryocyte
1
pericardium fibroblast
1
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