Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 15accessible chromatin
  • 7binding sites
  • 6histone modifications
Date released
  • 21February, 2021
  • 5June, 2020
  • 1January, 2021
  • 1November, 2021
Available data
  • 28bed bed3+
  • 10bigWig
Organism
  • 28Homo sapiens
Collection Tags
  • 18ChIP-Atlas
  • 8DGA
  • 1AMP
  • 1T1D
  • 1T2DKP
Biosample type
  • 13cell line
  • 8tissue
  • 7primary cell
Organ
  • 270epithelium
  • 130connective tissue
  • 98brain
  • 73pancreas
  • 67eye
  • 64bodily fluid
  • 62blood
  • 58kidney
  • 57vasculature
  • 49liver
  • 43blood vessel
  • 40musculature of body
  • 40skin of body
  • 37heart
  • 35embryo
  • 34intestine
  • 28bone element
  • 24limb
  • 22lymph node
  • 21artery
  • 21lung
  • 21mammary gland
  • 20large intestine
  • 20prostate gland
  • 16extraembryonic component
  • 13penis
  • 10adipose tissue
  • 9placenta
  • 9stomach
  • 8gonad
  • 8skeleton
  • 8uterus
  • 7adrenal gland
  • 6bone marrow
  • 6lymphatic vessel
  • 5bronchus
  • 5testis
  • 5trachea
  • 4esophagus
  • 4thymus
  • 4ureter
  • 4vein
  • 3lymphoid tissue
  • 3nerve
  • 3small intestine
  • 3spinal cord
  • 3spleen
  • 2ovary
  • 2thyroid gland
  • 1breast
  • 1mouth
  • 1nose
  • 1pituitary gland
  • 1tongue
  • 1urinary bladder
Project
  • 26AMP
  • 1ENCODE
  • 1T1D
Genome assembly (visualization)
  • 28hg19
  • 9GRCh38
BIOSAMPLE
TYPE

28 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
binding sites
histone modifications
cell line
MG63111
U2OS111
OCI-LY111
SJSA111
L1-S81
tissue
distal epiphysis1
distal epiphysis of femur1
distal epiphysis of humerus1
distal epiphysis of tibia1
proximal epiphysis1
primary cell
mononuclear cell of bone marrow21
megakaryocyte2
bone cell1
bone marrow cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego