Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
105
candidate regulatory elements
95
accessible chromatin
91
target gene predictions
59
chromatin state
49
gene expression
38
binding sites
31
histone modifications
21
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
150
September, 2022
137
February, 2021
53
November, 2021
23
June, 2020
19
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
11
May, 2020
10
January, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
4
April, 2020
4
January, 2021
4
May, 2022
3
November, 2020
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
389
bed bed3+
65
tsv
59
bigWig
51
bed bed9
7
txt
2
bigBed bed9
1
bed bed9+
1
bigBed narrowPeak
Organism
530
Homo sapiens
Biosample type
333
primary cell
97
tissue
56
in vitro differentiated cells
43
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
448
AMP
53
ENCODE
15
KPMP
4
ITG
4
LungMap
4
T1D
2
community
Genome assembly (visualization)
457
hg19
135
GRCh38
2
hg18
organ_slims!
stomach
BIOSAMPLE
TYPE
530 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
foreskin keratinocyte
11
4
4
osteoblast
2
5
2
1
2
3
2
fibroblast of lung
6
4
4
2
+ See 53 more…
tissue
adipose tissue
7
2
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 7 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
+ See 10 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
EH
2
1
1
EL
2
1
1
ELR
2
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download