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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
154
candidate regulatory elements
125
target gene predictions
112
accessible chromatin
97
chromatin state
67
gene expression
37
binding sites
31
histone modifications
27
eQTL
26
variant allelic effects
15
Fine-mapped variants
14
differential activity
4
caQTL
2
pQTL
Date released
219
September, 2022
155
February, 2021
58
November, 2021
24
March, 2020
23
February, 2024
23
June, 2020
22
January, 2020
22
May, 2020
19
August, 2021
19
May, 2021
18
February, 2020
17
September, 2023
12
May, 2024
12
October, 2022
9
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
6
April, 2019
4
February, 2023
4
January, 2021
4
May, 2022
4
October, 2019
3
April, 2020
3
November, 2019
3
November, 2020
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
504
bed bed3+
93
tsv
84
bed bed9
77
bigWig
12
bigBed bed9
7
txt
1
bed bed9+
1
bigBed narrowPeak
Organism
711
Homo sapiens
Biosample type
316
primary cell
309
tissue
50
in vitro differentiated cells
35
cell line
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
625
AMP
58
ENCODE
15
KPMP
4
ITG
4
T1D
3
LungMap
2
community
Genome assembly (visualization)
615
hg19
220
GRCh38
2
hg18
organ_slims!
blood
BIOSAMPLE
TYPE
711 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 54 more…
tissue
heart
37
20
5
21
3
1
1
2
heart left ventricle
11
7
3
8
1
1
1
2
adipose tissue
7
8
2
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
3
1
+ See 20 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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