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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
220
accessible chromatin
141
target gene predictions
137
candidate regulatory elements
92
differential activity
67
chromatin state
48
binding sites
41
variant allelic effects
31
histone modifications
7
eQTL
2
caQTL
Date released
217
February, 2021
190
September, 2022
155
September, 2023
130
November, 2021
76
February, 2024
38
March, 2023
36
May, 2021
30
June, 2020
23
August, 2021
22
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
7
March, 2020
7
October, 2022
6
August, 2018
5
March, 2024
5
October, 2019
4
January, 2022
3
August, 2017
3
May, 2022
1
July, 2020
1
November, 2019
Available data
619
bed bed3+
327
tsv
179
bigWig
78
txt
63
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
1042
Homo sapiens
Biosample type
846
primary cell
120
tissue
50
cell line
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
726
AMP
155
KPMP
130
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
686
hg19
264
GRCh38
BIOSAMPLE
TYPE
1042 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
3
2
2
1
1
2
hepatocyte
13
8
3
2
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 154 more…
tissue
ovary
1
1
6
8
4
1
pigmented layer of retina
20
thyroid gland
1
5
8
4
1
testis
1
1
3
7
3
1
1
1
breast epithelium
1
3
5
2
+ See 19 more…
cell line
EndoC_BH1
8
8
1
3
1
NT2-D1 cell
1
1
1
1
2
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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