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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
230
candidate regulatory elements
204
gene expression
122
target gene predictions
115
chromatin state
62
accessible chromatin
56
differential activity
16
variant allelic effects
15
binding sites
13
histone modifications
6
eQTL
Date released
326
September, 2022
239
February, 2021
140
September, 2023
28
August, 2021
22
June, 2020
20
May, 2020
14
January, 2020
10
November, 2021
9
February, 2020
5
May, 2021
4
February, 2024
4
March, 2020
4
March, 2024
3
August, 2017
3
January, 2022
3
October, 2022
2
January, 2021
1
April, 2019
1
May, 2019
1
May, 2022
Available data
457
bed bed3+
253
tsv
111
bed bed9
87
txt
41
bigWig
2
bigBed bed9
1
bed bed9+
Organism
839
Homo sapiens
Biosample type
435
tissue
328
primary cell
75
cell line
1
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
trachea
4
nose
1
pericardium
Project
687
AMP
140
KPMP
10
ENCODE
2
T1D
Genome assembly (visualization)
570
hg19
150
GRCh38
organ_slims!
trachea
BIOSAMPLE
TYPE
839 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
tissue
kidney
29
7
14
16
10
1
1
2
1
large intestine
27
14
13
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 27 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 69 more…
cell line
HEK293
3
1
1
1
2
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
ACHN
2
1
1
1
+ See 15 more…
in vitro differentiated cells
renal cell carcinoma
1
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