Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
158
candidate regulatory elements
102
target gene predictions
90
chromatin state
42
accessible chromatin
26
binding sites
25
gene expression
22
histone modifications
9
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
259
September, 2022
105
February, 2021
30
February, 2024
15
November, 2021
12
June, 2020
11
March, 2020
10
August, 2021
7
May, 2021
5
October, 2022
4
August, 2017
4
March, 2023
4
May, 2020
3
April, 2020
3
January, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
January, 2022
2
May, 2024
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
358
bed bed3+
85
bed bed9
34
bigWig
29
tsv
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
487
Homo sapiens
Biosample type
239
tissue
124
cell line
117
primary cell
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
467
AMP
15
ENCODE
3
LungMap
2
T1D
Genome assembly (visualization)
453
hg19
144
GRCh38
2
hg18
BIOSAMPLE
TYPE
487 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
lung
33
17
16
1
1
left lung
26
13
13
liver
13
10
9
4
1
1
2
7
1
1
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
+ See 1 more…
cell line
A549
21
19
18
1
2
1
HepG2
2
3
2
2
3
5
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 7 more…
primary cell
hepatocyte
2
3
1
8
1
13
4
2
endothelial cell of hepatic sinusoid
6
6
4
fibroblast of lung
6
4
4
2
hepatic stellate cell
2
1
1
3
1
1
1
type II pneumocyte
2
4
1
+ See 12 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download