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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
35
candidate regulatory elements
31
target gene predictions
28
accessible chromatin
25
gene expression
23
chromatin state
16
histone modifications
15
binding sites
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
61
September, 2022
35
February, 2021
29
February, 2024
11
March, 2020
10
August, 2021
8
November, 2021
6
June, 2020
4
March, 2023
4
May, 2020
4
May, 2021
3
August, 2017
3
January, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
January, 2022
2
May, 2024
1
July, 2020
1
March, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
131
bed bed3+
29
tsv
26
bigWig
19
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
194
Homo sapiens
Biosample type
80
primary cell
79
tissue
28
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
184
AMP
8
ENCODE
2
T1D
Genome assembly (visualization)
160
hg19
71
GRCh38
2
hg18
organ_slims!
blood
BIOSAMPLE
TYPE
194 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
2
3
8
13
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
1
3
1
1
1
1
megakaryocyte
2
2
pancreatic endothelial cell
1
3
+ See 6 more…
tissue
liver
13
10
4
1
9
2
1
7
1
1
ovary
8
6
1
1
4
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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