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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
43
candidate regulatory elements
33
target gene predictions
28
accessible chromatin
27
chromatin state
25
gene expression
17
binding sites
16
histone modifications
10
eQTL
6
Fine-mapped variants
4
differential activity
4
variant allelic effects
1
caQTL
Date released
73
September, 2022
40
February, 2021
29
February, 2024
13
March, 2020
10
August, 2021
7
June, 2020
6
November, 2021
4
January, 2020
4
March, 2023
4
May, 2020
4
May, 2021
3
August, 2017
3
February, 2020
3
May, 2022
2
January, 2021
2
January, 2022
2
May, 2024
2
October, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
143
bed bed3+
33
tsv
25
bigWig
23
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
214
Homo sapiens
Biosample type
94
tissue
82
primary cell
31
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
206
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
180
hg19
77
GRCh38
2
hg18
organ_slims!
brain
BIOSAMPLE
TYPE
214 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
Fine-mapped variants
differential activity
variant allelic effects
caQTL
tissue
liver
13
10
4
9
1
1
2
7
1
1
spinal cord
14
8
1
7
1
right lobe of liver
2
1
1
1
1
3
C1 segment of cervical spinal cord
1
1
3
primary cell
hepatocyte
2
3
8
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
1
3
1
1
1
1
astrocyte of the spinal cord
2
1
1
megakaryocyte
2
2
+ See 6 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
spinal cord
1
2
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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