Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
263
candidate regulatory elements
196
target gene predictions
156
chromatin state
137
accessible chromatin
83
histone modifications
72
gene expression
60
binding sites
54
eQTL
42
Fine-mapped variants
33
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
396
September, 2022
281
February, 2021
60
November, 2021
48
March, 2020
46
June, 2020
37
January, 2020
31
May, 2021
28
January, 2022
28
May, 2020
27
February, 2020
21
February, 2024
20
September, 2023
19
October, 2022
15
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
5
March, 2024
4
May, 2019
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
784
bed bed3+
141
bed bed9
136
tsv
78
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
1113
Homo sapiens
Biosample type
490
tissue
393
primary cell
167
cell line
62
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1028
AMP
60
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
989
hg19
319
GRCh38
2
hg18
BIOSAMPLE
TYPE
1114 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
binding sites
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
18
2
3
1
1
2
1
adipose tissue
7
8
6
2
3
1
4
1
caudate nucleus
5
3
4
2
1
1
2
3
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
thyroid gland
8
5
4
1
1
+ See 77 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
endothelial cell of umbilical vein
6
4
5
2
2
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
2
1
1
+ See 60 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 38 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 14 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download