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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
204
target gene predictions
192
candidate regulatory elements
119
accessible chromatin
117
chromatin state
77
gene expression
65
histone modifications
44
eQTL
41
Fine-mapped variants
34
binding sites
33
differential activity
28
variant allelic effects
2
sQTL
2
variant to gene
Date released
305
September, 2022
194
February, 2021
77
February, 2024
51
May, 2021
48
March, 2020
47
March, 2023
35
June, 2020
33
January, 2020
25
May, 2020
22
January, 2022
20
February, 2020
20
January, 2021
20
November, 2021
16
August, 2021
10
August, 2017
7
August, 2018
7
October, 2022
6
October, 2019
4
May, 2019
3
November, 2019
3
September, 2023
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
646
bed bed3+
153
tsv
106
bed bed9
80
bigWig
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
957
Homo sapiens
Biosample type
498
tissue
238
cell line
183
primary cell
37
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
916
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
814
hg19
293
GRCh38
organ_slims!
prostate gland
BIOSAMPLE
TYPE
958 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
Fine-mapped variants
binding sites
differential activity
variant allelic effects
sQTL
variant to gene
tissue
brain
16
29
2
18
1
3
2
1
1
islet of Langerhans
1
6
3
11
1
13
2
2
1
2
2
body of pancreas
5
8
4
2
1
3
1
caudate nucleus
3
5
2
4
1
1
2
3
1
pancreas
5
5
5
3
1
1
1
1
+ See 73 more…
cell line
H1-hESC
39
1
1
1
8
1
2
EndoC_BH1
1
8
8
3
1
H9
8
7
1
SK-N-DZ
2
4
1
2
1
SK-N-SH
3
4
2
1
+ See 34 more…
primary cell
pancreatic ductal cell
3
6
3
2
1
3
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 25 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 7 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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