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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
313
candidate regulatory elements
275
gene expression
261
accessible chromatin
258
target gene predictions
176
chromatin state
92
differential activity
80
histone modifications
60
binding sites
55
variant allelic effects
36
Fine-mapped variants
35
eQTL
2
caQTL
Date released
480
September, 2022
364
February, 2021
158
September, 2023
131
November, 2021
80
February, 2024
54
June, 2020
50
May, 2021
45
March, 2020
39
January, 2020
38
March, 2023
30
May, 2020
27
February, 2020
23
August, 2021
21
January, 2022
20
January, 2021
15
November, 2022
12
August, 2017
12
February, 2023
11
October, 2022
7
April, 2020
6
August, 2018
6
March, 2024
5
October, 2019
4
May, 2019
2
May, 2022
2
November, 2019
1
July, 2020
Available data
1031
bed bed3+
394
tsv
196
bigWig
164
bed bed9
78
txt
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1642
Homo sapiens
Biosample type
825
primary cell
641
tissue
146
cell line
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1328
AMP
155
KPMP
131
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1246
hg19
440
GRCh38
organ_slims!
vein
BIOSAMPLE
TYPE
1643 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
2
hepatocyte
1
13
8
3
1
4
1
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 152 more…
tissue
brain
29
1
2
16
18
3
1
1
2
small intestine
29
1
17
15
1
large intestine
27
1
14
13
1
sigmoid colon
10
1
7
5
caudate nucleus
5
1
2
3
4
1
1
3
2
+ See 95 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
4
1
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HT-29
2
1
2
1
1
1
+ See 25 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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