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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
275
gene expression
267
candidate regulatory elements
258
accessible chromatin
224
target gene predictions
146
chromatin state
92
differential activity
83
histone modifications
68
binding sites
56
variant allelic effects
36
Fine-mapped variants
35
eQTL
2
caQTL
Date released
394
September, 2022
344
February, 2021
158
September, 2023
129
November, 2021
77
February, 2024
51
June, 2020
49
May, 2021
44
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
21
January, 2022
20
January, 2021
15
November, 2022
15
October, 2022
12
February, 2023
10
May, 2024
9
August, 2017
7
April, 2020
6
August, 2018
6
March, 2024
5
October, 2019
4
May, 2019
2
May, 2022
2
November, 2019
1
July, 2020
Available data
956
bed bed3+
394
tsv
196
bigWig
137
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1541
Homo sapiens
Biosample type
890
primary cell
436
tissue
181
cell line
34
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1229
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1144
hg19
420
GRCh38
BIOSAMPLE
TYPE
1542 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
3
15
7
1
2
2
1
2
hepatocyte
13
2
8
3
1
4
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 157 more…
tissue
brain
1
29
2
16
18
3
1
1
2
caudate nucleus
1
5
2
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
cerebellum
2
3
1
2
2
1
3
2
+ See 84 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
4
1
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 37 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
+ See 9 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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