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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
423
candidate regulatory elements
255
target gene predictions
250
gene expression
232
chromatin state
141
accessible chromatin
76
histone modifications
60
differential activity
47
eQTL
42
binding sites
42
variant allelic effects
39
Fine-mapped variants
1
caQTL
Date released
636
September, 2022
405
February, 2021
143
September, 2023
54
March, 2020
53
June, 2020
46
January, 2020
41
May, 2020
39
February, 2024
38
August, 2021
31
November, 2021
29
February, 2020
26
January, 2022
20
May, 2021
13
August, 2017
10
October, 2022
8
March, 2024
5
May, 2019
4
March, 2023
2
May, 2022
2
November, 2019
1
April, 2019
1
July, 2020
1
September, 2018
Available data
980
bed bed3+
351
tsv
219
bed bed9
93
bigWig
87
txt
9
bigBed bed9
3
csv
1
bam
Organism
1607
Homo sapiens
Biosample type
975
tissue
440
primary cell
180
cell line
12
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1437
AMP
140
KPMP
31
ENCODE
Genome assembly (visualization)
1257
hg19
410
GRCh38
2
hg18
BIOSAMPLE
TYPE
1608 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
histone modifications
differential activity
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
tissue
kidney
29
14
7
16
10
2
1
1
1
brain
29
16
1
18
2
3
2
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
liver
13
10
1
9
4
2
1
7
1
1
+ See 104 more…
primary cell
hepatocyte
1
3
13
1
8
4
1
2
epithelial cell of proximal tubule
2
1
16
1
1
1
1
glomerular endothelial cell
2
1
14
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
2
1
5
1
2
+ See 86 more…
cell line
HepG2
2
3
2
2
5
3
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HEK293
3
1
1
1
1
2
+ See 33 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
+ See 1 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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