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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
335
candidate regulatory elements
247
gene expression
190
target gene predictions
187
chromatin state
126
accessible chromatin
66
differential activity
62
histone modifications
45
Fine-mapped variants
44
binding sites
43
variant allelic effects
42
eQTL
3
caQTL
Date released
495
September, 2022
355
February, 2021
158
September, 2023
54
March, 2020
53
January, 2020
48
May, 2020
45
June, 2020
32
February, 2020
29
August, 2021
25
January, 2022
19
February, 2024
15
May, 2021
11
November, 2021
11
October, 2022
7
August, 2017
6
March, 2024
6
May, 2019
4
February, 2023
4
March, 2023
4
November, 2019
3
April, 2020
3
May, 2024
2
October, 2019
1
April, 2019
Available data
798
bed bed3+
364
tsv
180
bed bed9
89
txt
83
bigWig
16
bigBed bed9
Organism
1389
Homo sapiens
Biosample type
773
tissue
476
primary cell
133
cell line
7
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1221
AMP
155
KPMP
11
ENCODE
3
LungMap
Genome assembly (visualization)
1036
hg19
351
GRCh38
BIOSAMPLE
TYPE
1390 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
histone modifications
Fine-mapped variants
binding sites
variant allelic effects
eQTL
caQTL
tissue
kidney
29
7
14
16
10
2
1
1
1
brain
29
1
16
18
2
3
1
1
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 87 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
2
5
1
1
2
+ See 97 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HEK293
3
1
1
1
1
2
SK-N-MC
2
1
1
1
1
2
+ See 26 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
renal cell carcinoma
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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